{
  "_id": "6ae0622995167d9b9260d3ec",
  "Package": "vmxr",
  "Title": "VeloMetrix R Client",
  "Version": "0.3.0",
  "Authors@R": "c(\nperson(given = \"Eric\", family = \"Novik\", email = \"eric@generable.com\", role = c(\"aut\", \"cre\")),\nperson(given = \"Juho\", family = \"Timonen\", role = \"ctb\"),\nperson(given = \"Generable\", role = c(\"cph\", \"fnd\")))",
  "Author": "Eric Novik [aut, cre], Juho Timonen [ctb], Generable [cph, fnd]",
  "Maintainer": "Eric Novik <eric@generable.com>",
  "Description": "A native R client for the VeloMetrix REST API (vmx-api).\nWraps the treatment-to-simulation analysis workflow in\nergonomic, pipe-friendly verbs that block-and-poll for\nasynchronous server jobs and return native R objects (tibbles\nand typed S3 objects). The package orchestrates server-side\njobs; it holds no business logic of its own. Targets API 0.2.x\nand 0.3 / CLI 0.6.x.",
  "License": "Apache License (>= 2)",
  "URL": "https://github.com/generable/vmxr",
  "BugReports": "https://github.com/generable/vmxr/issues",
  "VignetteBuilder": "knitr",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "Config/roxygen2/version": "8.0.0",
  "RoxygenNote": "7.3.3",
  "Config/pak/sysreqs": "libssl-dev",
  "Repository": "https://generable.r-universe.dev",
  "Date/Publication": "2026-10-27 04:09:45 UTC",
  "RemoteUrl": "https://github.com/generable/vmxr",
  "RemoteRef": "HEAD",
  "RemoteSha": "ee9981139c5a69ce64717dce5158f6fc88906f55",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-27 08:26:50 UTC",
    "User": "root"
  },
  "_user": "generable",
  "_type": "src",
  "_file": "vmxr_0.3.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/7e46efa5171f95891156f0565e3c1f0de5cb725de62ea9d03c82d15d64194465",
  "_filesize": 457589,
  "_sha256": "7e46efa5171f95891156f0565e3c1f0de5cb725de62ea9d03c82d15d64194465",
  "_expires": "2027-02-04T08:34:47.000Z",
  "_created": "2026-10-27T08:26:50.000Z",
  "_published": "2026-10-27T08:34:49.331Z",
  "_upstream": "https://github.com/generable/vmxr",
  "_status": "success",
  "_maintainer": {
    "name": "Eric Novik",
    "email": "eric@generable.com",
    "login": "ericnovik",
    "description": "Bayesian Inference, Decision Analysis, Stan, R, Viz.",
    "uuid": 1253501
  },
  "_jobs": [
    {
      "job": 122086333305,
      "time": 177,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12719413503"
    },
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      "time": 198,
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  "_buildurl": "https://github.com/r-universe/generable/actions/runs/40472673223",
  "_commit": {
    "id": "ee9981139c5a69ce64717dce5158f6fc88906f55",
    "author": "Jacki Buros Novik <jackinovik@gmail.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "feat: make vmx_nlmixr_data() specimen-aware (#30)\n\nA marker measured in more than one specimen is now one input per\nspecimen. pk_specimen selects one PK specimen or vmx_all_specimens(),\nand is required when the PK data records more than one. Each selected\nPD marker-and-specimen pair gets its own DVID and compartment. Each\nscope is admitted by its own recorded verdict, and pooling specimens\nwith different units is an error. The layout gains a specimen_type\ncolumn. Output for single-specimen data is unchanged.\n\nCo-authored-by: Claude Opus 5.5 <noreply@anthropic.com>",
    "time": 1793074185
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  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
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      "package": "knitr",
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      "package": "nlmixr2est",
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    {
      "package": "rmarkdown",
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    },
    {
      "package": "rxode2",
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      "version": ">= 3.0.0",
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    {
      "package": "withr",
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  "_owner": "generable",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-27",
      "n": 15
    },
    {
      "week": "2026-28",
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  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "ericnovik",
      "count": 23,
      "uuid": 1253501
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      "user": "jtimonen",
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  "_userbio": {
    "uuid": 17601327,
    "type": "organization",
    "name": "Generable",
    "followers": 9,
    "description": "State-of-the-art Bayesian platform for biomedical research"
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  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/vmxr"
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  "_devurl": "https://github.com/generable/vmxr",
  "_searchresults": 4,
  "_rbuild": "4.6.1",
  "_assets": [
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    "extra/citation.json",
    "extra/citation.txt",
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    "extra/manual.pdf",
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    "extra/NEWS.txt",
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    "extra/readme.md",
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  "_cranurl": false,
  "_exports": [
    "as_tibble",
    "vmx_all_specimens",
    "vmx_analysis_log",
    "vmx_client",
    "vmx_data_version",
    "vmx_data_version_archive",
    "vmx_data_version_create",
    "vmx_data_version_export",
    "vmx_data_version_table",
    "vmx_data_version_unarchive",
    "vmx_data_versions",
    "vmx_dataset",
    "vmx_dataset_cancel",
    "vmx_dataset_download",
    "vmx_dataset_files",
    "vmx_dataset_tags",
    "vmx_datasets",
    "vmx_dosing",
    "vmx_dosing_input",
    "vmx_dosing_input_status",
    "vmx_fit_global_estimates",
    "vmx_fit_obs_vs_pred",
    "vmx_fit_subject_estimates",
    "vmx_fit_vpc",
    "vmx_health",
    "vmx_login",
    "vmx_model_build",
    "vmx_model_build_artifacts",
    "vmx_model_build_cancel",
    "vmx_model_build_events",
    "vmx_model_build_export",
    "vmx_model_build_logs",
    "vmx_model_build_marker_selection",
    "vmx_model_build_report",
    "vmx_model_build_report_create",
    "vmx_model_build_results",
    "vmx_model_build_runs",
    "vmx_model_build_status",
    "vmx_model_catalog",
    "vmx_model_data",
    "vmx_model_describe",
    "vmx_model_fit",
    "vmx_model_fit_marker_selection",
    "vmx_model_fit_postprocessor_status",
    "vmx_model_fits",
    "vmx_modeling_options",
    "vmx_nca",
    "vmx_nca_analyses",
    "vmx_nca_get",
    "vmx_nca_marker_selection",
    "vmx_nca_result",
    "vmx_nlmixr_data",
    "vmx_nlmixr_default_cmt",
    "vmx_pd",
    "vmx_pd_marker",
    "vmx_pk",
    "vmx_prep_answer",
    "vmx_prep_questions",
    "vmx_prep_status",
    "vmx_sim_cancel",
    "vmx_sim_existing_subject",
    "vmx_sim_existing_subject_from_text",
    "vmx_sim_hypothetical_subject",
    "vmx_sim_hypothetical_subject_from_text",
    "vmx_sim_jobs",
    "vmx_sim_population",
    "vmx_sim_population_from_text",
    "vmx_sim_result",
    "vmx_sim_status",
    "vmx_studies",
    "vmx_study",
    "vmx_study_create",
    "vmx_study_update",
    "vmx_subjects",
    "vmx_torsten_data",
    "vmx_treatment",
    "vmx_treatment_create",
    "vmx_treatment_update",
    "vmx_treatments",
    "vmx_upload",
    "vmx_upload_ignore",
    "vmx_upload_unignore",
    "vmx_wait",
    "vmx_whoami"
  ],
  "_help": [
    {
      "page": "vmx_all_specimens",
      "title": "Select all specimens",
      "topics": [
        "vmx_all_specimens"
      ]
    },
    {
      "page": "vmx_analysis_log",
      "title": "Audit / analysis log for a study",
      "topics": [
        "vmx_analysis_log"
      ]
    },
    {
      "page": "vmx_client",
      "title": "Create a vmxr client",
      "topics": [
        "vmx_client"
      ]
    },
    {
      "page": "vmx_data_version",
      "title": "Fetch one data version",
      "topics": [
        "vmx_data_version"
      ]
    },
    {
      "page": "vmx_data_version_archive",
      "title": "Archive a data version",
      "topics": [
        "vmx_data_version_archive"
      ]
    },
    {
      "page": "vmx_data_version_create",
      "title": "Create a data version",
      "topics": [
        "vmx_data_version_create"
      ]
    },
    {
      "page": "vmx_data_version_export",
      "title": "Export a data version",
      "topics": [
        "vmx_data_version_export"
      ]
    },
    {
      "page": "vmx_data_version_table",
      "title": "A prepared data-version table",
      "topics": [
        "vmx_data_version_table"
      ]
    },
    {
      "page": "vmx_data_version_unarchive",
      "title": "Unarchive a data version",
      "topics": [
        "vmx_data_version_unarchive"
      ]
    },
    {
      "page": "vmx_data_versions",
      "title": "List data versions",
      "topics": [
        "vmx_data_versions"
      ]
    },
    {
      "page": "vmx_dataset",
      "title": "Fetch one dataset",
      "topics": [
        "vmx_dataset"
      ]
    },
    {
      "page": "vmx_dataset_cancel",
      "title": "Cancel a dataset's in-flight format job",
      "topics": [
        "vmx_dataset_cancel"
      ]
    },
    {
      "page": "vmx_dataset_download",
      "title": "Download a dataset's files",
      "topics": [
        "vmx_dataset_download"
      ]
    },
    {
      "page": "vmx_dataset_files",
      "title": "List the files in a dataset",
      "topics": [
        "vmx_dataset_files"
      ]
    },
    {
      "page": "vmx_dataset_tags",
      "title": "The tags on a dataset",
      "topics": [
        "vmx_dataset_tags"
      ]
    },
    {
      "page": "vmx_datasets",
      "title": "List datasets",
      "topics": [
        "vmx_datasets"
      ]
    },
    {
      "page": "vmx_dosing",
      "title": "Dosing events table",
      "topics": [
        "vmx_dosing"
      ]
    },
    {
      "page": "vmx_dosing_input",
      "title": "Create a dosing input for a fit",
      "topics": [
        "vmx_dosing_input"
      ]
    },
    {
      "page": "vmx_dosing_input_status",
      "title": "Dosing-input status",
      "topics": [
        "vmx_dosing_input_status"
      ]
    },
    {
      "page": "vmx_fit_global_estimates",
      "title": "Global (population) parameter estimates (tidy)",
      "topics": [
        "vmx_fit_global_estimates"
      ]
    },
    {
      "page": "vmx_fit_obs_vs_pred",
      "title": "Observed-vs-predicted diagnostic (tidy)",
      "topics": [
        "vmx_fit_obs_vs_pred"
      ]
    },
    {
      "page": "vmx_fit_subject_estimates",
      "title": "Subject-level parameter estimates (tidy, long)",
      "topics": [
        "vmx_fit_subject_estimates"
      ]
    },
    {
      "page": "vmx_fit_vpc",
      "title": "Visual predictive check artifact",
      "topics": [
        "vmx_fit_vpc"
      ]
    },
    {
      "page": "vmx_health",
      "title": "Connectivity probe",
      "topics": [
        "vmx_health"
      ]
    },
    {
      "page": "vmx_login",
      "title": "Authenticate to VeloMetrix via OIDC device-code",
      "topics": [
        "vmx_login"
      ]
    },
    {
      "page": "vmx_marker_selection",
      "title": "Accepted specimen selections of an NCA, model-build run or model fit",
      "topics": [
        "vmx_marker_selection",
        "vmx_model_build_marker_selection",
        "vmx_model_fit_marker_selection",
        "vmx_nca_marker_selection"
      ]
    },
    {
      "page": "vmx_model_build",
      "title": "Start a model build run (optionally wait)",
      "topics": [
        "vmx_model_build"
      ]
    },
    {
      "page": "vmx_model_build_artifacts",
      "title": "Download build-run artifacts",
      "topics": [
        "vmx_model_build_artifacts"
      ]
    },
    {
      "page": "vmx_model_build_cancel",
      "title": "Cancel a build run",
      "topics": [
        "vmx_model_build_cancel"
      ]
    },
    {
      "page": "vmx_model_build_events",
      "title": "Build-run events (SSE stream)",
      "topics": [
        "vmx_model_build_events"
      ]
    },
    {
      "page": "vmx_model_build_export",
      "title": "Markdown export of a build run",
      "topics": [
        "vmx_model_build_export"
      ]
    },
    {
      "page": "vmx_model_build_logs",
      "title": "Build-run logs",
      "topics": [
        "vmx_model_build_logs"
      ]
    },
    {
      "page": "vmx_model_build_report",
      "title": "Build-run report status (signed HTML report URL when ready)",
      "topics": [
        "vmx_model_build_report"
      ]
    },
    {
      "page": "vmx_model_build_report_create",
      "title": "Request build-run report generation",
      "topics": [
        "vmx_model_build_report_create"
      ]
    },
    {
      "page": "vmx_model_build_results",
      "title": "Build-run results",
      "topics": [
        "vmx_model_build_results"
      ]
    },
    {
      "page": "vmx_model_build_runs",
      "title": "List model build runs",
      "topics": [
        "vmx_model_build_runs"
      ]
    },
    {
      "page": "vmx_model_build_status",
      "title": "Build-run status",
      "topics": [
        "vmx_model_build_status"
      ]
    },
    {
      "page": "vmx_model_catalog",
      "title": "Model catalog",
      "topics": [
        "vmx_model_catalog"
      ]
    },
    {
      "page": "vmx_model_data",
      "title": "Fetch model-ready tidy tables for a data version",
      "topics": [
        "vmx_model_data"
      ]
    },
    {
      "page": "vmx_model_describe",
      "title": "Describe a model",
      "topics": [
        "vmx_model_describe"
      ]
    },
    {
      "page": "vmx_model_fit",
      "title": "Fetch one model fit's details",
      "topics": [
        "vmx_model_fit"
      ]
    },
    {
      "page": "vmx_model_fit_postprocessor_status",
      "title": "Model-fit postprocessor status",
      "topics": [
        "vmx_model_fit_postprocessor_status"
      ]
    },
    {
      "page": "vmx_model_fits",
      "title": "List model fits",
      "topics": [
        "vmx_model_fits"
      ]
    },
    {
      "page": "vmx_modeling_options",
      "title": "Preview modeling options for a data version",
      "topics": [
        "vmx_modeling_options"
      ]
    },
    {
      "page": "vmx_nca",
      "title": "Run an NCA analysis",
      "topics": [
        "vmx_nca"
      ]
    },
    {
      "page": "vmx_nca_analyses",
      "title": "List NCA analyses",
      "topics": [
        "vmx_nca_analyses"
      ]
    },
    {
      "page": "vmx_nca_get",
      "title": "Fetch one NCA analysis",
      "topics": [
        "vmx_nca_get"
      ]
    },
    {
      "page": "vmx_nca_result",
      "title": "NCA result table (PK parameters, per subject and result interval)",
      "topics": [
        "vmx_nca_result"
      ]
    },
    {
      "page": "vmx_nlmixr_data",
      "title": "NONMEM-layout event dataset for nlmixr2 / rxode2",
      "topics": [
        "vmx_nlmixr_data"
      ]
    },
    {
      "page": "vmx_nlmixr_default_cmt",
      "title": "Default route-to-compartment mapping for 'vmx_nlmixr_data()'",
      "topics": [
        "vmx_nlmixr_default_cmt"
      ]
    },
    {
      "page": "vmx_pd",
      "title": "PD observations table",
      "topics": [
        "vmx_pd"
      ]
    },
    {
      "page": "vmx_pd_marker",
      "title": "Select a PD marker in one specimen or in all specimens",
      "topics": [
        "vmx_pd_marker"
      ]
    },
    {
      "page": "vmx_pk",
      "title": "PK observations table",
      "topics": [
        "vmx_pk"
      ]
    },
    {
      "page": "vmx_prep_answer",
      "title": "Answer prep questions and resume formatting",
      "topics": [
        "vmx_prep_answer"
      ]
    },
    {
      "page": "vmx_prep_questions",
      "title": "Questions raised by prep (when awaiting input)",
      "topics": [
        "vmx_prep_questions"
      ]
    },
    {
      "page": "vmx_prep_status",
      "title": "Prep status for a dataset",
      "topics": [
        "vmx_prep_status"
      ]
    },
    {
      "page": "vmx_sim_cancel",
      "title": "Cancel a simulation job",
      "topics": [
        "vmx_sim_cancel"
      ]
    },
    {
      "page": "vmx_sim_existing_subject",
      "title": "Simulate existing (observed) subjects",
      "topics": [
        "vmx_sim_existing_subject"
      ]
    },
    {
      "page": "vmx_sim_existing_subject_from_text",
      "title": "Simulate existing subjects from dosing text",
      "topics": [
        "vmx_sim_existing_subject_from_text"
      ]
    },
    {
      "page": "vmx_sim_hypothetical_subject",
      "title": "Simulate hypothetical subjects",
      "topics": [
        "vmx_sim_hypothetical_subject"
      ]
    },
    {
      "page": "vmx_sim_hypothetical_subject_from_text",
      "title": "Simulate hypothetical subjects from dosing text",
      "topics": [
        "vmx_sim_hypothetical_subject_from_text"
      ]
    },
    {
      "page": "vmx_sim_jobs",
      "title": "List simulation jobs for a model fit",
      "topics": [
        "vmx_sim_jobs"
      ]
    },
    {
      "page": "vmx_sim_population",
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    {
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